Selected Publications


A full and up-to-date publication list is available at Google Scholar.


Symptom dimensions of major depression in a large community-based cohort.

Wainberg M, Zhukovsky P, Hill SL, Felsky D, Voineskos A, Kennedy S, Hawco C, Tripathy SJ
Psychological Medicine

2021

Diversity amongst human cortical pyramidal neurons revealed via their sag currents and frequency preferences.

Moradi H, Rich S, Wang L, Chen FD, Zhang L, Carlen PL, Tripathy SJ*, Valiante TA*
Nature Communications

2021

Cannabis, schizophrenia genetic risk, and psychotic experiences : A cross-sectional study of 109,308 participants from the UK Biobank.

Wainberg M, Jacobs GR, di Forti M, Tripathy SJ
Translational Psychiatry
Press

2021

Estimating and Correcting for Off-Target Cellular Contamination in Brain Cell Type Specific RNA-Seq Data.

Sicherman J, Newton D, Pavlidis P, Sibille E, Tripathy SJ
Frontiers in Molecular Neuroscience

2021

Patch-seq: Past, Present, and Future.

Lipovsek M, Bardy C, Cadwell CR, Hadley K, Kobak D, Tripathy SJ
Journal of Neuroscience

2021

Consequences of NMDA receptor deficiency can be rescued in the adult brain.

Mielnik C, Binko M, Chen Y, Funk A, Johannsson E, Katheron I, Sivananthan N, Islam R, Milenkovic M, Horsfall W, Ross R, Groc L, Salahpour A, McCullumsmith M, Tripathy SJ, Lambe E, Ramsey AJ.
Molecular Psychiatry

2020

Assessing the molecular overlap between human major depressive disorder and three mouse models of chronic stress.

Tripathy SJ
Biological Psychiatry

2020

Single nucleus RNA sequencing implicates OPCs and deep layer excitatory neurons in the pathophysiology of major depression.

Nagy C, Maitra M, Tanti A, Suderman M, Theroux JF, Davoli MA, Perlman K, Yerko V, Tripathy SJ, Pavlidis P, Mechawar N, Ragoussis J, Turecki G
Nature Neuroscience

2020

The Neuron Phenotype Ontology: A FAIR Approach to Proposing and Classifying Neuronal Types.

Gillespie TH, Tripathy SJ, Sy MF, Martone ME, Hill SL

2020

Transcriptomic correlates of electrophysiological and morphological diversity within and across neuron cell types.

Bomkamp C*, Tripathy SJ*, Bengtsson Gonzales C, Hjerling-Leffler J, Craig AM, Pavlidis P. PLoS Computational Biology.

2019

Transcriptomic evidence for alterations in astrocytes and parvalbumin interneurons in five cohorts of schizophrenia and bipolar subjects

Toker L, Mancarci BO, Tripathy SJ, Pavlidis P. Biological Psychiatry.

2018

Assessing transcriptome quality in patch-seq datasets.

Tripathy SJ, Toker L, Bomkamp C, Mancarci O, Belmadani M, Pavlidis P. Frontiers in Cellular Neuroscience.

2018

Modeling sources of inter-laboratory variability in electrophysiological properties of mammalian neurons.

Tebaykin D*, Tripathy SJ*, Binnion B, Li B, Gerkin RC, Pavlidis P. Journal of Neurophysiology.

2017

Cross-laboratory analysis of brain cell type specific transcriptomes with applications to bulk tissue data.

Mancarci BO, Toker L, Tripathy SJ, Li B, Rocco B, Sibille E, Pavlidis P. eNeuro.

2017

Transcriptomic correlates of neuron electrophysiological diversity.

Tripathy SJ, Toker L, Li B, Crichlow CL, Tebaykin D, Mancarci O, Pavlidis P. PLoS Computational Biology.

2017

Neurodata Without Borders: Creating a Common Data Format for Neurophysiology.

Teeters JL, ...Tripathy SJ, ... Svoboda K, Sommer FT. Neuron.

2015

Agile text mining with Sherlok.

Richardet R, JC Chappelier, Tripathy SJ, Hill S. IEEE Big Data.

2015

Brain-wide analysis of electrophysiological diversity yields novel categorization of mammalian neuron types.

Tripathy SJ, Burton SD, Geramita M, Gerkin RC, Urban NN. Journal of Neurophysiology.

2015

NeuroElectro: a window to the world’s neuron electrophysiology data.

Tripathy SJ, Savitskaya J, Burton SD, Urban NN, Gerkin RC. Frontiers in Neuroinformatics .

2014

Intermediate intrinsic diversity enhances neural population coding.

Tripathy SJ, Padmanbhan K, Gerkin RC, Urban NN. PNAS.

2013